Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGESGAAAAPSITLNDEHTMPVLGLGV---AELSDDETERAVSAALEIGCRLIDTAYAYGNEAAVGRAI----AASGVAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPAP-----------PVGKY----VD---AWGGMIQSRGEGHARSIGVSNFTAENIENLID---LTFVTPAVNQIELHPLLNQDELRKANAQHTVVTQSYCPLALGR-----------LLDNPTVTSIASEYVKTPAQVLLRWNLQLGNAVVVRSARPERIASNFDVFDFELAAEHMDALGGLNDGTRVREDPLTYAGT |
1IHI Chain:A ((8-304)) | ------------VKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKY-KPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVR----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IHI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -132944 for 2144 contacts (-62.0/contact) +
2D Compatibility (PS) -27910 + (NN) -9577 + (LL) 1116
1D Compatibility (HY) -22800 + (ID) 5400
Total energy: -197515.0 ( -92.12 by residue)
QMean score : 0.460
|
|
|