Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPGRWSAETRLALVRRARRMNRALAQAFPHVYCELDFTTPLELAVATILSAQSTDKRVNLTTPALFARYRTARDYAQADRTELESLIRPTGFYRNKAASLIGLGQALVERFGG---------EVPATMDKLVTLPGVGRKTANVILGNAFGIPGITVDTHFGRLVRRWRWTTAEDPVKVEQAVGELIERK--EWTLLSHRVIFHGRRVCHARRPACGVCVLAKDCPSFGL-GPTEPLLAAPLVQGPETDHLLALAGL
4UNF Chain:A ((33-253))
----------------LAWVKERLHEEYGDQDP-TPRRDPMHELISTILSQRTTHADEEAAYQELR-TLGDWDAITLAPTDAVAHAIRRSNYPESKAPRIQETLRRIKAAPGGYDLDFLRDLPVKDALKWLTDLPGVGVKTASLVLLFNYARPVFPVDTHVHRVSTRVGVIPRMGEQAAHRALLALLPPDPPYLYELHINFLSHGRQVCTWTRPKCGKCILRERCDAYALYGDKVPSFS------------------
General information:
TITO was launched using:
RESULT:
Template:
4UNF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119141 for 1571 contacts (-75.8/contact) +
2D Compatibility (PS) -22033 + (NN) -11708 + (LL) 2784
1D Compatibility (HY) -9200 + (ID) 2550
Total energy: -161848.0 ( -103.02 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_4UNF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UNF-query.scw
PDB file :
Tito_Scwrl_4UNF.pdb
: