Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAPPVHDRAHHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-----SFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQE----LLGRGVSSCATCDG--FFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRASKIMLDRARNNDKIRFLTNHTVVAVDGDTT---VTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWLAEHAATGEADSTDALIGAQR
1VDC Chain:A ((5-325))----------ETHNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQEI-----------------


General information:
TITO was launched using:
RESULT:

Template: 1VDC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -210237 for 2728 contacts (-77.1/contact) +
2D Compatibility (PS) -33570 + (NN) -10413 + (LL) 1676
1D Compatibility (HY) -26800 + (ID) 7900
Total energy: -287244.0 ( -105.29 by residue)
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_1VDC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VDC-query.scw
PDB file : Tito_Scwrl_1VDC.pdb: