Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPSPVRILFVDDEERILRSLAMQFRRHYEVLTESDPRRALERLKTERIQVLVSDQRMPQMSGAELLAQARERYPETLRILLTGYSDLDAAVDALNDGGIFRYLTKPWNPQEMAFTLRQAAEIASRQGLPAPPAATLAAPLSVLLLDDDPETLDCVGAFCHAGGHRLLRARNLAEALVWLNTEPVEVLVSDLKLAGEHTAPLLKSLAQAHPRLLSLVVTPFRDTQALLELINQAQIFRYLPKPIRRGLFEKGLKAAAEQALLWRGRSLPEVDRLAEVPRDEREKERVGSLLGMLGRLRERLTA |
| 2RJN Chain:A ((9-125)) | ---------------------------------------------------------------------------------------------------------------------------------------------TVMLVDDEQPILNSLKRLIKRLGCNIITFTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYADAQATIDAVNRGKISRFLLKPWEDEDVFKVVEKGLQ--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96482 for 928 contacts (-104.0/contact) +
2D Compatibility (PS) -12616 + (NN) -8611 + (LL) 14648
1D Compatibility (HY) -10000 + (ID) 1300
Total energy: -114361.0 ( -123.23 by residue)
QMean score : 0.523
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