Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKQILVLPGDGIGPEIMAEAVKVLELANDRFQLGFELAEDVIGGAAIDKHGVPLADQTLQRAR-QADAVLLGAVGGPKWDRIERDIRPERGLLKIRSQLGLFANLRPAILYPQLAAASSLKPEVVAGLDILIVRELTGGIYFGQPREQRVLEN--GERQAYDTLPYSESEIRRIARVGFDMARVRNN-------------RLCSVDKANVLASSQ-LWREVV---EEVAKDYPDVELSHMYVDNAAMQLVRAPKQFDVMVTDNMFGDILSDEASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFSQATAADAIEQAVSKVLDQG-LRTGDIWSEGCRKVGTREMGDAVVAALKNL |
| 3TY3 Chain:A ((15-366)) | ------LIPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTH-KVAGYSSP---IVALRKKMGLYANVRPV---KSLDGAKG-KP-----VDLVIVRENTECLYV---KEERMVQNTPGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYASINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANV-GDNFVMSEPVHGSAPDIAGRGIANPVATFRSVALMLEFMGHQDAAAD-IYTAVDKVLTEGKVLTPDLGG----KSGTNEITDAVLANIHN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TY3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159879 for 2831 contacts (-56.5/contact) +
2D Compatibility (PS) -35291 + (NN) -9103 + (LL) 1948
1D Compatibility (HY) -26800 + (ID) 6450
Total energy: -235575.0 ( -83.21 by residue)
QMean score : 0.505
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