Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPIHWKPFLAPSTLALKFAIKTL--LAGGLALWCAFRFDLEQPQWALMTVLIVSQPLSGMVV----AKGLFRLLGTLVGTA---------MSVLMIALFAQ-----------------APWLFLLAISLWLGLCTAASTSLRNHVSYAF---VLSGYTV----------------AIIGL----------PAVDQPLLVFEQAVARCTEICLGIICAS--AVSAI---LWPQRVEQNLDKQAHA-----TWLLGMQAARGEIDPRQRQPQG--------LLNALSKI------VEVDAQRD-HAWFEGERGRRRAGALALLSRDLLSLLRTARGVARQRARLSEEEERRV----------------------------------------ERWLAALASALEGTDPASMQALREELA-------------QVAVEPQWSNDQRYL------------------------LTRCSVLLLKAVNAEKGMRAVASGEVE---GRVGSAGTLS-----------------------------------WHRDL---QMALFYGT--------RSALALLG----------LSVYWIYTAWPAASGAMLLAAVV----CSLFANRDNAVAIGLSFLRGIVYAIPAAMLV----SQWLLPQWNGFPLLCLAMGVPLF-----FATLG-------------------MAVP----------VTAGTATSFAIH---FIVLVAPRNQMDYNLATLLNSAQGVLIGVGFAVVIFRL------LTLRPGWLTRRLLDATCVDLGRLTR--RPLAQAEN--------WFGG----RMADRLLRLARH--ANLLPEQERRRWDDGLLALDLGNELIHLRACLEGARGVLRKA---------RDRFLGELGELLEAGPAGPRSD--RLERISLPLREALERDARH----DDEASRLARAALAQLLFTWQ-QWCHQEESHESA |
| 4WD9 Chain:A ((5-1006)) | -SFKAQPFLVRNTILCPNDKRSFTEYTQVIETVSKNKVFLEQLLLANPKLYDVMQKYNAGLLKKKRVKKLFESIYKYYKRSYLRSTPFGLFSETSIGVFSKSSQYKLMGKTTKGIRLDTQWLIRLVHKMEVDFSKKL-SFTRNNANYKFGDRVFQVYTINSSELEEVNIKYTNVYQIISEFCENDYQKYEDICETVTLCYGDEYRELSEQYLGSLIVNHYLISNLQKDLLSDFSWNTFLTKVEAIDEDKKYIIPLKKVQKFIQEYSEIEIGEGIEKLKEIYQEMSQILENDNYIQIDLISDSEINFDVKQKQQLEHLAEFLGNTTKSVRRTYLDDYKDKFIEKYGVDQEVQITELFDSTFGIGAPYNYNHPRNDFYESEPSTLYYSEEEREKYLSMYVEAVKNHNVINLDDLESHYQKMDLEKKSELQGLELFLNLAKEYEKDIFILGDIVGNNNLGGASGRFSALSPELTSYHRTIVDSVERENENKEITSCEIVFLPENIRHANVMHTSIMRRKVLPFFTSTSHNEVLLTNIYIGIDEKEKFYARDISTQEVLKFYITSMYNKTLFSNELRFLYEISLDDKFGNLPWELIYRDFDYIPRLVFDEIVISPAKWKIWGRDVNSKMTIRELIQS--KEIPKEFYIVNGDNKVYLSQKNPLDMEILESAIKKSSKRKDFIELQEYFEDENIINKGEKGRVADVVVPFIRAFIREKRVSVERREKLPFNEWLYLKLYISINRQNEFLLSYLPDIQKIVANLGGNLFFLRYTDPKPHIRLRIKCSDLFLAYGSILEILKRSRKNRIMSTFDISIYDQEVERYGGFDTLELSEAIFCADSKIIPNLLTLIKDTNNDWKVDDVSILVNYLYLKCFFQNDNKKILNFLNLVGDQIFYDKNFKELKHAIKNLFLKMIAQDFELQKVYSIIDSIIHVHNNRLIGIERDKEKLIYYTLQRLFVSEETKDFNLDLVSVSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -358619 for 4176 contacts (-85.9/contact) +
2D Compatibility (PS) -70001 + (NN) -18030 + (LL) 576
1D Compatibility (HY) -48000 + (ID) 5400
Total energy: -499474.0 ( -119.61 by residue)
QMean score : 0.230
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