Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQGHPEVIDYLNTLLTGELAARDQYFIHSRMYEDWGFSKLYERLNHEMEEETQHADALLRRILLLEGTPRMRP-DDIHPGTTVPEMLEADLKLERHVRAALAKGIALCEQHKDFVSRDILKAQLADTEEDHAYWLEQQLGLIARMGLENYLQSQI
3IS8 Chain:S ((2-154))
-KGDKKVIQHLNKILGNELIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGLPNLQDLGKLLIGENTQEMLQCDLNLELKATKDLREAIVHCEQVHDYVSRDLLK-DILESEEEHIDYLETQLGLIQKVGLENYLQSHM
General information:
TITO was launched using:
RESULT:
Template:
3IS8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59223 for 1157 contacts (-51.2/contact) +
2D Compatibility (PS) -17289 + (NN) -15587 + (LL) 352
1D Compatibility (HY) -14400 + (ID) 3600
Total energy: -109747.0 ( -94.85 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_3IS8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IS8-query.scw
PDB file :
Tito_Scwrl_3IS8.pdb
: