Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQLKDKVIIITGGCQGLGRAMGEYLAGKGARL-ALVDLNRERLDEAVAACKAAGGDARAYVCNVADEEQVTHMVAQVASDFGAINGLVNNAGILRDGLTIKVKDGQLSKMSLAQWQSVIDVNLTGVFLCTREVAAKMIELKNEGAIVNISSIS-RAGNMGQANYSAAKAGVAADTVVWAKELARYGIRVAGVAPGFIETEMTAGMKPEALEKMTAGIPLKRMGKPVEIAHSVAYIF--ENDYYTGRVLELDGGLRL
3VZP Chain:A ((15-256))-----RIAYVTGGMGGIGTAICQRLAKDGFRVVAGCGPNSPRREKWLEQQKALGFDFIASEGNVADWDSTKTAFDKVKSEVGEVDVLINNAGITRDVV--------FRKMTRADWDAVIDTNLTSLFNVTKQVIDGMAD-RGWGRIVNISSVNGQKGQFGQTNYSTAKAGLHGFTMALAQEVATKGVTVNTVSPGYIATDMVKAIRQDVLDKIVATIPVKRLGLPEEIASICAWLSSEESGFSTGADFSLNGGLHM


General information:
TITO was launched using:
RESULT:

Template: 3VZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123645 for 1987 contacts (-62.2/contact) +
2D Compatibility (PS) -25829 + (NN) -9052 + (LL) 1116
1D Compatibility (HY) -15600 + (ID) 4800
Total energy: -177810.0 ( -89.49 by residue)
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_3VZP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VZP-query.scw
PDB file : Tito_Scwrl_3VZP.pdb: