Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAGIDSRVSGEALSASFQVIRERMQAEAQAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTGEGAKPSREDTVRTHYHGTLIDGTVFDSSYQRGQPAEFPVGG--VIAGWVEALQLMNAGSKWRLHVPSELAYGGQ-AVGSIPPHSVLVFDVELLEIL |
2PBC Chain:C ((1-96)) | ---------------------------------------------------------------------------------------------------------------GSPIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PBC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54412 for 631 contacts (-86.2/contact) +
2D Compatibility (PS) -9856 + (NN) 431 + (LL) 7956
1D Compatibility (HY) -6800 + (ID) 2200
Total energy: -64881.0 ( -102.82 by residue)
QMean score : 0.496
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