Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDLQQLFENNVRWAEAIKQEDPDFFAKLARQQTPEYLWIGCSDARVPANEIVGMLPGDLFVHRNVANVVLHTDLNCLSVIQFAVDVLKVKHILVTGHYGCGGVRASLHNDQLGLIDGWLRSIRDLAYEYREHLEQLPTEEERVDRLCELNVIQQVANVSHTSIVQNAWHRGQSLSVHGCIYGIKDGLWKNLNVTVSGLDQLPPQYRLSPLGGCC
4WAJ Chain:B ((1-206))
MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRVSPEKLTNLEPGELFVHRNVANQVIHTDFNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKDLGLINNWLLHIRDIWFKHGHLLGKL-SPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYDVNDGFLVDQGVMATSRETLEISYR--------
General information:
TITO was launched using:
RESULT:
Template:
4WAJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152845 for 1499 contacts (-102.0/contact) +
2D Compatibility (PS) -22026 + (NN) -9102 + (LL) -188
1D Compatibility (HY) -23200 + (ID) 5050
Total energy: -212411.0 ( -141.70 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_4WAJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WAJ-query.scw
PDB file :
Tito_Scwrl_4WAJ.pdb
: