Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLPSGDQPAEPGNA
4HT9 Chain:B ((4-65))
---GQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPS-----------------
General information:
TITO was launched using:
RESULT:
Template:
4HT9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45029 for 383 contacts (-117.6/contact) +
2D Compatibility (PS) -6769 + (NN) -639 + (LL) 236
1D Compatibility (HY) -10400 + (ID) 2900
Total energy: -65501.0 ( -171.02 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_4HT9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HT9-query.scw
PDB file :
Tito_Scwrl_4HT9.pdb
: