Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQEVRFSRLEPEQRKALLIEATLACLKRHGFQGASVRKICAEAGVSVGLINHHYDGKDALVAEAYLAVTGRVMRLLRGAIDTAPGGARPRLSAFFEASFSAELLDPQLLDAWLAFWGAV---GSIEAIGRVHDHSYGEYRALLVGVLRQLAEEGGW-ADFDAELAAISLSALLDGLWLESGLNPATFT-PRQGVQICEAWVDGLEAGAHRRFRRAMEAC
2UXU Chain:A ((5-210))
-------TKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK-------
General information:
TITO was launched using:
RESULT:
Template:
2UXU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132044 for 1455 contacts (-90.8/contact) +
2D Compatibility (PS) -22635 + (NN) -16187 + (LL) 1632
1D Compatibility (HY) -6000 + (ID) 1900
Total energy: -177134.0 ( -121.74 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_2UXU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UXU-query.scw
PDB file :
Tito_Scwrl_2UXU.pdb
: