Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLA-ALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH
2OL1 Chain:C ((22-131))
-------------------PTRQSPGAAGYDLYSAY--DYTIPPGERQLIKTDISMSM--PKFCYGRIAPRSGLSLK-GIDIGG--GVIDEDYRGNIGVILINNGKCTFNVNTGDRIAQLIYQRIYYPELEEVQSL----------------
General information:
TITO was launched using:
RESULT:
Template:
2OL1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79732 for 679 contacts (-117.4/contact) +
2D Compatibility (PS) -11415 + (NN) -3194 + (LL) 1376
1D Compatibility (HY) -8000 + (ID) 2100
Total energy: -103065.0 ( -151.79 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_2OL1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OL1-query.scw
PDB file :
Tito_Scwrl_2OL1.pdb
: