Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDIKIMALGGVRENGKNLYVVEVNDSIFVLDAGLKYPENE-----QLGVDVVIPNLDYLIENKKRVQGIFLTHGHADAIGALPYIIAE--VKAPVFGSPLTIELAKLFVKNSTA-------V--K-------KFNNFHVIDSETEIEFQ-DAVISFFKTTHSIPESMGIVIGTK--EGNIVYTGDFKFDQAARKYYQTDLARLAEIGRDGVLALLSDSANATSNDQVASEYEVGDEIKSVIEDA---EGRVIVAAVASNLIRIQQVFDAAAENGRR------VVLTGFDIENIVRTAIRM-KRIH--------------IADENMIIK---P---KDMTRYEDNELLILETGRMGEPINGLQKMAIGRHRYVQIKDGDLVFIVTTPSIAKEAV-VARVENLIYKAG----GSVKLIT---QN-LRVSGHANGRELQLLMNLLK--PKYLFPIQGEYRDLSAHAGLA-QEVGMSADDIYIVKRGDIMVLEKDGFFHSGFVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVVITVSKKEKKIISKARVNTRGFVYVKKSRDILRESAELVNTTVEDYLSKDTFDWGELKGKVRDEVSKFLFDQTKRRPAILPVVMEVR |
| 3AF5 Chain:A ((187-650)) | -RWIRITGLGGFREVGRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHFD--APEFQYV-LREGLLDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGH-ILGSAIVHLHIGNGLHNIAITGDFKFIPTRLLEP------ANAKF-PRLETLVMESTYGGANDIQMPREEAEKRLIEVIHNTIKRGGKVLIPAMA--VGRAQEVMMVLEEYARIGGIEVPIYLDGMIWEA-TAIHTAYPEYLSRRLREQIFKEGYNPF-LSEIFHPVANSRERQDIIDSNEPAIIIASSGMLVG------GPSVEYFKQLAPDPKNSIIFVSYQAEGTLGRQVQSGIREIPMVGEEGRTEVIKVNMEVHTIDGFSGHADRRELMNYVAKVRPRPERIITVHGEPQKCLDLATSIHRKFGIS---TRAPNNLDTIRLR----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203388 for 3553 contacts (-57.2/contact) +
2D Compatibility (PS) -41956 + (NN) -5455 + (LL) 10772
1D Compatibility (HY) -16400 + (ID) 4250
Total energy: -260677.0 ( -73.37 by residue)
QMean score : 0.376
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