Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVAISGAGVAGAALAHWLQRTGH-TPTVIERAPKFRTGGYMIDFWGVGYQVAKRMGITDQIAAAGYHMEHVRSVGPTGKVKADLGVDVFRRMVGDDFTSLPRGDLAAAIYTTIED---QVETIFDDSIATIDEHRDGVRLTFERT----APRDFDLVIGADGLHSNVRRLVFGPERDFEHYLG--CKVAACVVDGYRPRDERSYVLYNTVD--RQLARFALRG-----DR--TMFLFVFRAEHD---NPGV-----APKDELRDQFGDVGWESRDILAALDDVEDLYFDVVS-QIRMDRWSRGRVLLIGDAAGCISLLGGEGTGLAITEAYVLAGELARAGGDHRRAFDAYEKRLRPFIEGKQASAAKFIWFFATRTRFGLWFRNVAMRTMNFGPLATLFAGSVRDDFELPDYTW |
| 3C96 Chain:A ((5-388)) | IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSGATVWSEPRG-VEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDGHGKPQALGADVLVGADGIHSAVRAHLHPDQRP-LSHGGITMWRGVTEFD-R--FLDGKTMIVANDEHWSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQLILQYPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARNA-DVAAALREYEEARRPTANKIILANRERE--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205595 for 2907 contacts (-70.7/contact) +
2D Compatibility (PS) -36501 + (NN) -9819 + (LL) 3156
1D Compatibility (HY) -11200 + (ID) 3400
Total energy: -263359.0 ( -90.59 by residue)
QMean score : 0.468
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