Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRTVLVLNGPNLNLLGTREPQTYGRRTLGEIADECAAFAETRGFAVDFRQTNQEGQLLDWIHQARGRVAGIVINPAAWTHTSVALRDALAAVE-LPVVEVHLSNVHQREAFRHHSYVSPVALGVICGFGSLGYRLALEHFAERFEAAA
1GU0 Chain:G ((9-146))
----IMILNGPNLNLLGQRQPEIYGSDTLADVEALCVKAAAAHGGTVDFRQSNHEGELVDWIHEARLNHCGIVINPAAYSHTSVAILDALNTCDGLPVVEVHISNIHQREPFRHHSYVSQRADGVVAGCGVQGYVFGVERIAALAG---
General information:
TITO was launched using:
RESULT:
Template:
1GU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128561 for 1090 contacts (-117.9/contact) +
2D Compatibility (PS) -14991 + (NN) -3331 + (LL) 748
1D Compatibility (HY) -13600 + (ID) 4000
Total energy: -163735.0 ( -150.22 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_1GU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GU0-query.scw
PDB file :
Tito_Scwrl_1GU0.pdb
: