Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLPSTIQTLTLFLTSGGVLLSLYVSASLSYLLYSDILLKFSPKITAPTMTLDCTNASNVQAVNRSATKEMTFLLPEPEWTYPRLSCQGSTFQKALLISPHRFGEARGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTREDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGREWTYIGVDGPDSNALIKIKYGEAYTDTYHSYANNILRTQESACNCIGGDCYLMITDGSASGISKCRFLKIREGRIIKEIFPTGRVEHTEECTCGFASNKTIECACRDNNYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESNGDKGRGGIKG-GFVHQRMASKIGRWYSRTMSKTERMGMELYVKYDGDPWTDSDAL-DPSGVMVSIKEPGWYSFGFEIKDK----KCDVPCIGIEMVHDGGKK--TWHSAATAIYCLMGSGQLLWDTVTGVDMAL |
4B7J Chain:A ((83-465)) | ----------------------------------------------------------------------------VKLAGNSSLCPVSGWAIYSKDNSIRIGS---KGDVFVIREPFISCSPLECRTFFLTQGALLNDKHSNGTIKDRSPYRTLMSCPIGEVPSPYNSRFESVAWSASACHDGINWLTIGISGPDNGAVAVLKYNGIITDTIKSWRNNRLRTQESECACVNGSCFTVMTDGPSDGQASYKIFRIEKGKIVKSVEMNAPNYHYEECSC-YPDSSEITCVCRDNWHGSNRPWVSFN-QNLEYQIGYICSGIFGDNPRPNDK--TGSCGPVSSNGANGVKGFSFKYGN-----GVWIGRTKSISSRNGFEMIWDPNG--WTGTDNDFSIKQDIVGINEWSGYSGSFVQHPELTGLDCIRPCFWVELIRGRPKENTIWTSGSSISFCGVNSDTVGWSWPDGAELPF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104660 for 3459 contacts (-30.3/contact) +
2D Compatibility (PS) -39593 + (NN) -12308 + (LL) 6420
1D Compatibility (HY) -21600 + (ID) 6600
Total energy: -178341.0 ( -51.56 by residue)
QMean score : 0.499
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