Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQYLELMQKVLDEGTQKNDRTGTGTLSIFG-HQMRFNLQDG-FPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWA------------DENGDLGPVYGKQWRAWPT--------PDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYV---AD---GKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI |
| 1F28 Chain:A ((6-297)) | EQQYLNLVQYIINHGEDRPDRTGTGTLSVFAPSPLKFSLRNKTFPLLTTKRVFIRGVIEELLWFIRGETDSLKLREKNIHIWDANGSREYLDSIGLTKRQEGDLGPIYGFQWRHFGAEYIDCKTNYIGQGVDQLANIIQKIRTSPYDRRLILSAWNPADLEKMALPPCHMFCQFYVHIPSNNHRPELSCQLYQRSCDMGLGVPFNIASYALLTCMIAHVCDLDPGDFIHVMGDCHIYKDHIEALQQQLTRSPRPFPTLSLNRSITDIEDFTLDDFNIQNYHPYETIKMKMSI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186369 for 2116 contacts (-88.1/contact) +
2D Compatibility (PS) -28302 + (NN) -10342 + (LL) 0
1D Compatibility (HY) -29600 + (ID) 6450
Total energy: -261063.0 ( -123.38 by residue)
QMean score : 0.766
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