Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGETAEEQGGPVPPPVAPGGPGLGGAPGGRREPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALK-----LLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQEDKDHWDEVKEEMTSALATMRVDYDQVKIKDLKTSNNRLLNKRRKKQAGSSSASQGCNNQ |
| 4MVF Chain:A ((56-364)) | ----------------------------------------EDKYIIDEKLGQGTYGCVYKGIDKVTNQLYAIKEEKKDRLKNINRFFQEIEI-MKKLDHPNIVKLYETYENDNY----IYLIMELCSGRELFDSIIENG--SFTEKNAATIMKQIFSAIFYLHSLNIVHRDLKPENFLFQSENKDSLLKIIDFGLSKNL-----------------------KYDKKCDIWSSGVIMYTLLCGYPPFY--------------------CFYENDWGSISSDAKNLITKLLTYNPNERCTIEEALNHPWITQ-MTKS--HVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122689 for 1894 contacts (-64.8/contact) +
2D Compatibility (PS) -28092 + (NN) -12560 + (LL) 2000
1D Compatibility (HY) -23200 + (ID) 5550
Total energy: -190091.0 ( -100.36 by residue)
QMean score : 0.460
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