Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAPSPSGGGGSGGGSGSGTPGPVGSPAPGHPAVSSMQGKRKALKLNFANPPFKSTARFTLNPNPTGVQNPHIERLRTHSIESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSV---LDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEE-----REFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQMPATPSSPMYVD |
| 5D9H Chain:B ((26-294)) | -----------------------------------------------------------------------------------------------------------IGSGATAVVQAALCKPRQERVAIKRINLEKCQTSMDELLKEIQAMSQCSH-PNVVTYYTSFVVKDELWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQI-HRDLKAGNILLGEDGSVQIADFGVSAFLATGGDVTRN-GTPCWMAPEVMEQV---RGYDFKADMWSFGITAIELATGAAPYHKYPPM-KVLMLTLQNDPPTLETGVEDKEMMKKYGKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQKAKNREYLIEKLLT----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5D9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114675 for 1887 contacts (-60.8/contact) +
2D Compatibility (PS) -27066 + (NN) -16736 + (LL) 4300
1D Compatibility (HY) -21600 + (ID) 4600
Total energy: -180377.0 ( -95.59 by residue)
QMean score : 0.411
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