Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSAWKPPFCHPSVLRLVNRALKQG--S-INKVIKIHSRASVILPNCLGLKFAVYNGKDYIPVSVNDQNMIGHKFGEFSPTRKFAGHNGDKKAVRR
3J0O Chain:S ((49-125))
------------AKFVNKVRRSKEKCPAGEKPVPVKTHYRSMIVIPELVGGIVGVYNGKEFVNVEVKF-DMIGKYLAEFAMTYKPTTHGKCCUAAG-
General information:
TITO was launched using:
RESULT:
Template:
3J0O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46552 for 449 contacts (-103.7/contact) +
2D Compatibility (PS) -8419 + (NN) -5062 + (LL) 676
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -65657.0 ( -146.23 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_3J0O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J0O-query.scw
PDB file :
Tito_Scwrl_3J0O.pdb
: