Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRPIQISEPNSNEVVFGIDLGTTNSLIAVVNKAGNVEIFTDEQGRELLPSVISYENNTLKTGYDVDQ-------NAIYPIKRLMGKSVEDL-----NKEGINLEIDNESEKIIRVKC-SEDKYLTPIEISAEILKALCERVKKSTGMEVRKAVITVPAYFDDSARNATKYAAKLAGIEVLRLINEPTAAALSYSIAKNNNSGIYA-VYDLGGGTFDISILKLHQGVFQVLAVGGDTKLGGDDFDHLLSMIILDKYRKKVGKDLNSLKHLSTKSRSIKEHLSKNISSTFEFNI------NGELFKCKITKEEFEQTISSLVNKTINIVTHTISNIDLKIEDIEGVILVGGATRVPLVQSSLVKLFGNKVLN-DVDPDKAVAIGAALQAHYLTSNSKDRNVLLDVLPLSLGIETMGGIVEKIIPRNTPLPVSETREFTTYIDGQTAIKIHVCQGEREIIEDNKSLAQFELKGIPQLPAGSARVEIEFIVNVDGILTVTAREKTTGIEQTVEINSSFGLSEADIQDMVNQSINNFDEDMKARSLAEAKINGNKLIHLVESNDNLSTDKNLKNLLQNTKNALQGNDLNEINNAITELESFSLELCESTNK
1NGF Chain:A ((8-383))----------------GIDLGTTYSCVGVF-QHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1NGF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -172041 for 2954 contacts (-58.2/contact) +
2D Compatibility (PS) -37813 + (NN) -8317 + (LL) 14612
1D Compatibility (HY) -20000 + (ID) 6550
Total energy: -230109.0 ( -77.90 by residue)
QMean score : 0.579

(partial model without unconserved sides chains):
PDB file : Tito_1NGF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NGF-query.scw
PDB file : Tito_Scwrl_1NGF.pdb: