Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKTKIMGILNVTPDSFSDGGKFNN-VETAINRVKAMID-----EGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG-F-----DVKISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKY-DAEIILMHNGNGNRD-------E----------------------------PVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELVA----------------TEYPVLLATSRKRFTKEMMGYDTTPVERDEVTAATTAYGIMKGVRAVRVHNVELNAKLAKGIDFLKENENARHNLS |
2BMB Chain:A ((223-543)) | -SPTYIMAIFNATPDSFSDGGEHFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYRSNVAKEAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILSHTRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQLDDLKDKTVLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFAKTWKQNLQIIRHIPILKNYSFTMNSNNSQVYVNLRNMPVLLGPSRKKFIGHITKDV-DAKQRDFATGAVVASCIGFGSDMVRVHDVKNCSKSIKLADAIYKG-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2BMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -117366 for 2144 contacts (-54.7/contact) +
2D Compatibility (PS) -28583 + (NN) -21678 + (LL) 640
1D Compatibility (HY) -14400 + (ID) 4650
Total energy: -186037.0 ( -86.77 by residue)
QMean score : 0.705
|
|
|