Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQAVKVERRETLKQKPNTSQLGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYKRDGEVALFRPEENFKRLNNS--LARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFATEGALGVG--ASHQYKLLIILSPSGAYYGGETLKPTKIYVEDEYVRAVRGGV-GFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPKY |
2EJ3 Chain:A ((9-301)) | ------------------------------------------WMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGPAIFRLKEHVKRFYNSAKVLRMEIPFAPE-ELEEAIKEVVR-------RNGYRSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEW--------VRKGARLITSSWARFPANVMPGKAKVGGNYVNSALAKMEAVAAGADEALLLD--EEGYVAEGSGENLFFVRDGVIYALE-HSVNLEGITRDSVIRIAKDLGYEVQVVRATRDQLYMA------DEVFMTGTAAEVTPVSMIDWRP----IGKGTAGPVALRLREVYLEAVTGRRPEYEGW------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105570 for 2319 contacts (-45.5/contact) +
2D Compatibility (PS) -30537 + (NN) -13136 + (LL) 4708
1D Compatibility (HY) -17200 + (ID) 5000
Total energy: -166735.0 ( -71.90 by residue)
QMean score : 0.466
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