Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEVKTFYNGNTMPQIGLGTFRVEN--DENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIRAGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPGT------------NEAVMVD------TWKGMEDLYKNNKAKNIGVSNFEPEHLEALLAQ--VSIKPVINQVEYHPYLTQHKLKLYLAAQHIVMESWSPLMNAQ---------ILNDETIKDIAQELGKSPAQVVLRWNVQHGVVIIPKSVTPNRISENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKTFEG |
4JQ4 Chain:B ((12-304)) | -------DGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSH-PWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100360 for 2137 contacts (-47.0/contact) +
2D Compatibility (PS) -27838 + (NN) -11919 + (LL) 820
1D Compatibility (HY) -29600 + (ID) 5550
Total energy: -174447.0 ( -81.63 by residue)
QMean score : 0.433
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