Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSETIFGKILTGEIPSFKVYEDDYVYAFLDISQVTKGHTLLIPKKASANIFETDEETMKHIGAALPKVANAIKRAFNPDGLNIIQNNGEFADQSVFHIHFHLIPRYENDIDGFGYKWETHEDILDNDAKQQIAEQIQAQF
3LB5 Chain:A ((28-161))
-NNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQADGITVMQFNEAASQQTVYHLHFHIIPRMEG--IEL---------ITPTEILEENAKKIRAAL
General information:
TITO was launched using:
RESULT:
Template:
3LB5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67421 for 953 contacts (-70.7/contact) +
2D Compatibility (PS) -13811 + (NN) -5777 + (LL) 704
1D Compatibility (HY) -13200 + (ID) 2750
Total energy: -102255.0 ( -107.30 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_3LB5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LB5-query.scw
PDB file :
Tito_Scwrl_3LB5.pdb
: