Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDGPILTTKIEEE
3IU7 Chain:A ((44-281))
--VQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLV-DRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLV-VLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTG----------
General information:
TITO was launched using:
RESULT:
Template:
3IU7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69781 for 2068 contacts (-33.7/contact) +
2D Compatibility (PS) -26845 + (NN) -15826 + (LL) 1436
1D Compatibility (HY) -14000 + (ID) 4450
Total energy: -129466.0 ( -62.60 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_3IU7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IU7-query.scw
PDB file :
Tito_Scwrl_3IU7.pdb
: