Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METLQTHRVLQALI-GHFTPFL-ESGITELIINTEQELWLYKINNTREKRGH---VLFDKAFLLRFCEQLASFRGLFFD-EEHPTLNCSIPFTRYRVSANHFSITTNN-QITLNIRVPRLKPLSL---EDFTFK------VSNPESLKNLALKGHNILISGETSSGKTSLLNALLDCVNKDERVVSVEDSQELDLKAFSNCVGLLVGKQENTRFNYEDALNMAMRLNPDRLIVGEIDTRNAALFLRLGNTGHKGMLSTIHANSAQNTLEALSLNLSMRY-THSLDKDLMRAYFKSAIDVIVHVNKINNERQIAEVLWTKEL |
2PT7 Chain:A ((28-319)) | ---------LRHATEELFGDFLKMENITEICYNGNKVVWVLKNNGEWQPFDVRDRKAFSLSRLMHFARCCASFKKKTIDNYENPILSSNLAN-GERVQIVLSPVTVNDETISISIRIPSKTTYPHSFFEEQGFYNLLDNKEQAISAIKDGIAIGKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFF----GGNITSADCLKSCLRMRPDRIILGELRSSEAYDFYNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNSAARNIKFESLIEGFKDLIDMIVHINHHKQCDEFYIK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PT7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185685 for 2079 contacts (-89.3/contact) +
2D Compatibility (PS) -30113 + (NN) -17859 + (LL) 1584
1D Compatibility (HY) -15600 + (ID) 4000
Total energy: -251673.0 ( -121.05 by residue)
QMean score : 0.459
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