Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAKEIGELFAQGKG-TMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE |
2KGW Chain:A ((217-326)) | ---------------------------------------------------------------------------------------------------------------------------------------------------AVTGGPIAFGNDGASLIPADYEILNRVADKLKACPDAR--VTINGYTDNTG----SEGINIPLSAQRAKIVADYLV--ARGVAGDHIATVGLGSVNPIASNATPEGRAKNRRVEIVVN----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KGW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17095 for 796 contacts (-21.5/contact) +
2D Compatibility (PS) -11765 + (NN) -7218 + (LL) 12424
1D Compatibility (HY) -3600 + (ID) 1500
Total energy: -28754.0 ( -36.12 by residue)
QMean score : 0.435
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