Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTKLILLYGGKSAEHEVSLQTAFSVINALDLEKFEAAPIYITNEGEWIQGPLLSGKLDFVEQLRFSATDTIKLATTESEKSEGEAISPAVLEADGQETVVFPLLHGPNGEDGTVQGLFEVLNIPYVGNGVLASSAAMDKIVMKKIFADAGIPQVPAVAVRLIDWKNYQEEMVAEMEEVLTYPVFVKPANLGSSVGISKATNKKELVDAMTEAFLYDRRVVVEQGVVAREIEMGVLGNDTPVCSVPGEILPEGAVATFYDYKAKYQDNNTALIIPTEVDPEILEQMKEYAIQAFLGLDASGLVRADFFLTEDNQLFLNEVNTMPGFTPYSMYPLLWQETGLPYGALIERLVDLAKERHAAKNALKYKLED |
3R5X Chain:A ((2-305)) | NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMD---------------------------L----------------IEKAKDIDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWIELTKMEDLN------FDELDKLGFPLVVKPNS----VGVKIVYDKDELISMLETVFEWDSEVVIEKYIKGEEITCSIFD-GKQL--PIISIRHA---AEFFDYNAKYDDAS-TIEEVIELPAELKERVNKASLACYKALKCSVYARVDMMVKD-GIPYVMEVNTLPGMTQASLLPKSADAAGIHYSKLLDMIIETSLRVRKEE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147404 for 2414 contacts (-61.1/contact) +
2D Compatibility (PS) -33657 + (NN) -16094 + (LL) 4420
1D Compatibility (HY) -19200 + (ID) 4400
Total energy: -216335.0 ( -89.62 by residue)
QMean score : 0.536
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