Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTTIIAFIFVFGLIVFFHELGHFLFAKRAGIMVKDFSIGFGPKIFAYRKKETQYTIRLLPIGGYVRMAGEDGEEIELKPGYRVGLELTPEETVSKIIVNGKDQYVNAQPIEVSLCDLEKELFIEGYEDYDDTKKVRYQVERDALVIDGKIETMITPYDRSFNAKSLGNRAMTIFAGPLFNFILAILIFTALAFVQGGVPSTDNTLGNVLPD--GAAAEAGLKKGDEVLSINGKETKSWTDIVQNVSE-NPGKTLDFKIERDGKTQDIDVK------PATQKENGKDVGKIGVETPMDSSFTAKITNGFTQTWNWIVQIFTILGNMFTGGFSLDMLN-GPVGIYTSTQQVVQYGFMTVLNWTAVLSINLGIVNLLPLPALDGGRLMFFLYELVRGKPIDPKKEGIIHFAGFALLMVLMILVTWNDIQRAFF |
| 4JJ0 Chain:A ((55-235)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------GGFVAPNVQFSEAHWQGMEALPLSIELKRKLKLPLDLEGLLIDETSLNAAVSGLLAGDVLVAINGRKVKTLKKMQKETRRVQMDRRASLTVYRKGRLLTLTLSEEKNLGLAQVETAPMILPGDIMPHPYRGPCTQCHAIGTTGHITPDPDGIVLPPGPIRAGAKMPHRDRGPCAACHAIIQ---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JJ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15517 for 1095 contacts (-14.2/contact) +
2D Compatibility (PS) -17904 + (NN) -1070 + (LL) 19452
1D Compatibility (HY) -800 + (ID) 1100
Total energy: -16939.0 ( -15.47 by residue)
QMean score : 0.075
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