Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKEEMNARQKKIRNFSIIAHIDHGKSTLADRILEQTGALTHR--EMKNQLLDSMDLERERGITIKLNAVQLKYKAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAAD-----------PERVREEIEDVIG---------LD--ASDAVLASAKSGIGI-------------------------------------------------------------------------------------------------------------EDILEQIVEKVPEPSG---------------------------DVNKPLKALIFDSVFDAYR-GVIANIRIMDGVVKAGDRIKMMSNGK---------EFEVTEVGVFSPK-ATPRDELLVGDVGYLTAAIKNVGD-TRVGDTITLANN-PAEEALDGYR-KLNPMVYCGLYPIDSSKYNDLRDALEKLELNDSALQFE-AETSQALGFGFRCGFLGLLHMEIIQERIEREF-NIDLITTAPSVIYHVNLTDGSN---------------IVV-----------D---------------------------------------NPAEM-------------------------------------P---------------E---P---G---------------VIESVEEPYVKATVMVPNDYVGAVMELAQNKRGNFITMEYLD-DIRVSIVYEIPLSEIVYDFFDQLKSSTKGYASFDYELIGYKASKLVKMDILLNAEKVDALSFIVHRDFAYERGKIIVEKLKELIPRQQFEVPIQAAIATKIVSRSTIKALRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKQIGSVEVPQEAFMAILKMDESK |
| 3JB9 Chain:B ((134-931)) | -----LLTGTDDVRSFIVAGHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVIEGVMINTTRIIKHAILHDMPIVLVLNKVDRLILELRLPPNDAYHKLRHVIDEVNDNICQISKDLKYRVSPELGNVCFASCDLGYCFTLSSFAKLYIDRHGGIDVDLFSKRLWGDIYFDSKTRKFAKQSLDGSGVRSFVHFILEPLYKLHTLTISDEAEKLKKHLSSFQIYLKPKDYLLDPKPLLQLICASFFGFPVGFVNAVTRHIPSPRENAARKASQSYIGPINSSIGKAILEMSREESAPLVMHVTKLYNTVDANNFYAFARVYSGQVKKGQKVKVLGENYSLEDEEDMVVAHIAEICVPCARYRLHVDGAVAGMLVLLG-GV---DNSISKTATIVSDNLKDDPYIFRPIAHMSESVFKVAVEPHNPSELPKLLDGLRKTNKSYPLSITKVEESGEHTIFG-----TGEMYMDCLLYDLRTLYSEIEIRVSDPVARFCETAVDTSSIKCFSDTPNKKNRITMVVEPLEKGISNDIENGKVNINWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRGTNILRDDTLSTDVDKNVLNSVKEYIKQGFQWGTREGPLCDETIRNVNFRLMDVVLAPEQIYRGGGQIIPTARRVCYSSFLTASPRLMEPVYMVEVHAPADSLPIIYDLLTRRRGHVLQDIPRPGSPLYLVRALIPVIDS-CGFETDLRVHTQGQAMCQMVFDHWQV---------VPGDPLDKSIK----------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227005 for 3870 contacts (-58.7/contact) +
2D Compatibility (PS) -52339 + (NN) -8138 + (LL) 11260
1D Compatibility (HY) -21200 + (ID) 5450
Total energy: -302872.0 ( -78.26 by residue)
QMean score : 0.473
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