Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIGIIGAMEEEVELLKNSMSSVEEIVIGGAKFYIGEIASKEVVLLESGIGKVNAALGTTLMADRFKPEVIINTGSAGGMAEGLAVGDVIISDRLAYGDVDVTEFGYTYGQVPRMPAFYQGDAVLLKKAETIYREYFATSENKAVYGLVVTNDSFIMRPDQHEIIRTFFPDVKAVEMEAAAIAQVAYQFDIPFLIIRAISDLANQEATISFDEFIHLAAKQSATCIIELLKTI
3BL6 Chain:A ((2-230))
MMIGIIGAMEEEVTILKNKLTQLSEISVAHVKFYTGILKDREVVITQSGIGKVNAAISTTLLINKFKPDVIINTGSAGALDESLNVGDVLISDDVKYHDADATAFGYEYGQIPQMPVAFQSSKPLIEKVSQVVQQ----QQLTAKVGLIVSGDSFIGSVEQRQKIKKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEAEMSFEAFLEKAAVSSSQTVEALVSQL
General information:
TITO was launched using:
RESULT:
Template:
3BL6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171094 for 2066 contacts (-82.8/contact) +
2D Compatibility (PS) -25111 + (NN) -14231 + (LL) 420
1D Compatibility (HY) -22800 + (ID) 5800
Total energy: -238616.0 ( -115.50 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_3BL6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BL6-query.scw
PDB file :
Tito_Scwrl_3BL6.pdb
: