Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNIDVLQNWLKDQGAEVGFLTDPENIAYFSGYHSEPHERVLGLAVFSDSEPFLFTPALEVEDVRGGDWTHPAYGYNDTENPFTIIADEIKKRVANPSKFAIEKKHMSVDRYEQLGGLFSGSSFIPIEHKIEQIRLIKTEAELKILKEAALLADYAVQVGVDEIAEGKTEAEIVAKIEYEMKKKGVTAMSFDTMVLTGKNGALPHGTPGETKIKKGDLVLFDLGVVHKGYCSDITRTVAF-GDISDEQKKIYDTVLEAQIAAVEKVKAGVKASEIDLTARNIIRE----AG--------------FGDYFPHRLGHGLGASVHEFPSITETNSMELQENMVFTIEPGIYVPG---------VAGVRIEDDLVVTKDGVQVLTE-FPKTLQVIE |
| 2V3Z Chain:A ((160-431)) | --------------------------------------------------------------------------------------------------------------------------ATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGCILHYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVAPGLYIAPDAEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V3Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109927 for 2053 contacts (-53.5/contact) +
2D Compatibility (PS) -26929 + (NN) -11110 + (LL) 6572
1D Compatibility (HY) -17200 + (ID) 3950
Total energy: -162544.0 ( -79.17 by residue)
QMean score : 0.511
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