Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKLILGLVMMMALFSLAACGGGGDVVKTDSGDVTKDELYDAMKDKYGSEFVQQLTFEKILGDKYKVSDEDVDKKFNEYKSQYGDQFSAVLTQSGLTEKSFKSQLKYNLLVQKATEANTDTSDKTLKKYYETWQPDITVSHILVADE---------------NKAKEVEQKLKD-GEKFADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFEKAAYALKNKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKDANVKVEDKDLKDAFKDFDGSSSSDSDSSK
2JZV Chain:A ((141-245))----------------------------------------------------------------------------------------------------------------------------------------SKKASHILIKVKSKKSDKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALFKLK-DGEVSEVVKSSFGYHIIKADK-------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2JZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20961 for 650 contacts (-32.2/contact) +
2D Compatibility (PS) -10120 + (NN) -9645 + (LL) 11880
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: -35796.0 ( -55.07 by residue)
QMean score : 0.727

(partial model without unconserved sides chains):
PDB file : Tito_2JZV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JZV-query.scw
PDB file : Tito_Scwrl_2JZV.pdb: