Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKLILGLVMMMALFSLAACGGGGDVVKTDSGDVTKDELYDAMKDKYGSEFVQQLTFEKILGDKYKVSDEDVDKKFNEYKSQYGDQFSAVLTQSGLTEKSFKSQLKYNLLVQKATEANTDTSDKTLKKYYETWQPDITVSHILVADE---------------NKAKEVEQKLKD-GEKFADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFEKAAYALKNKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKDANVKVEDKDLKDAFKDFDGSSSSDSDSSK |
2JZV Chain:A ((141-245)) | ----------------------------------------------------------------------------------------------------------------------------------------SKKASHILIKVKSKKSDKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALFKLK-DGEVSEVVKSSFGYHIIKADK------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20961 for 650 contacts (-32.2/contact) +
2D Compatibility (PS) -10120 + (NN) -9645 + (LL) 11880
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: -35796.0 ( -55.07 by residue)
QMean score : 0.727
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