Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIFIEVMKERFGEF--EGETVWKWTMINDHDMRMSVLNYGAIVTSLETKDKFGDFANISLGFTNLDDYLAHSPYFGATLGPVAGRITNGQFSLDGKQFQLIQNEGSNHRHGGKFNFS---KKLWDVSVEKSLDQIVMTFEYCWADGENGYPGKIDAKMTYTLNNKNEWLVDYEARSNQPTIYNPSNHIYFNLSGEAGSTVLQHQLWVNSDSFLPIDEEFLPIGEKRLAENTIFDLRAGREVAEITQSQDQQVKLVGAGLDHTFILKHEN-GRPDAVLFDPKSGRRLEMETKADSVLIYTANSLDG-SFEIDERAVPKYAGITMETQGLVDAINHEGFGDIVLRPEKPFTSRTAFRFTVES |
| 1SNZ Chain:A ((2-341)) | ---ASVTRAVFGELPSGGGTVEKFQLQS-DLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGG---VRGFDKVLWTPRVLS----NGVQFSRISPDGEEGYPGELKVWVTYTLDGGE-LIVNYRAQASQATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQ----DFH-L-NGFDHNFCLKGSKEKHFCARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAVNQPRFPPVLLRPGEEYDHTTWFKFSV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122463 for 2911 contacts (-42.1/contact) +
2D Compatibility (PS) -35609 + (NN) -6476 + (LL) 1080
1D Compatibility (HY) -22800 + (ID) 6300
Total energy: -192568.0 ( -66.15 by residue)
QMean score : 0.433
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