Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQLFFRYGSMNSGKTIEILKVAHNYEEQNKTVAIFTSGIDDRDQVGFISSRIGLKREATPIFSDTNIFEIVVNIKPKPNCVLLDESQFLEKEHVFQLAKIVDELNIPVIAYGLKNDFRNELFEGSKYLLLYADKLEEMKTICWFCAK-KATMVLRVDDKGKPVYTGEQIMIGGNDHYYPVCRKCHANPPIK
2ORW Chain:A ((2-181))
SGKLTVITGPMYSGKTTELLSFVEIYKLGKKKVAVFKPK-----HSTMIVS----GVEAHVIERPEEMRKY---IEEDTRGVFIDEVQFFNPSLFEVVKDLL-DRGIDVFCAGLDLTHKQNPFETTALLLSLADTVIKKKAVCHRCGEYNATLTLKVA-GG-----EEEIDVGGQEKYIAVCRDCYNTLK--
General information:
TITO was launched using:
RESULT:
Template:
2ORW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101947 for 1344 contacts (-75.9/contact) +
2D Compatibility (PS) -18441 + (NN) -9001 + (LL) 1064
1D Compatibility (HY) -11600 + (ID) 2600
Total energy: -142525.0 ( -106.05 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_2ORW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ORW-query.scw
PDB file :
Tito_Scwrl_2ORW.pdb
: