Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVRLYIARHGKTMFNTIGRAQGWSDTPLTTFGELGIKELGLGLKASNISFKEAFSSDSGRTLQTMEIILREVQQENIPYTRDKRIREWCFGSLDGGYDGDLFNGVLPRV-SNGDMSHLTHEEIANLICQVDTAGWAEPWAILSNRILSGFTAIAKKIEDIGGGNAIVVSHGMTIATFLWLIDHSTP---RSLGIDNGSVSVVDFED-GTFSIQSIGDMSYREKGREILEKTLQ
1FZT Chain:A ((6-210))
-APNLLVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLGGERLKSRGYKFDIAFTSALQRAQKTCQIILEEVGEPNLETIKSEKLNERYYGDLQGLNKDDAR-KKWGAEQVQIWRR-----------SYDIAPPNGESLKDTAERVLPYYKSTIVPHI-LKGEKVLIAAHGNSLRALIMDLEGLTGDQIVKRELATGVPIVYHLDKDGKYVSKELIDN---------------
General information:
TITO was launched using:
RESULT:
Template:
1FZT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79351 for 1715 contacts (-46.3/contact) +
2D Compatibility (PS) -21195 + (NN) -6955 + (LL) 2572
1D Compatibility (HY) -4400 + (ID) 2100
Total energy: -111429.0 ( -64.97 by residue)
QMean score : 0.291
(partial model without unconserved sides chains):
PDB file :
Tito_1FZT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FZT-query.scw
PDB file :
Tito_Scwrl_1FZT.pdb
: