Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLKDKNIFITGSSRGIGLAIAHQFAQLGANIVLNGRSEISEDLIAE-FADYGVKVIAISGDVSSFEDANRMIKEAIASLGSVDVLVNNAGITNDKLMLKMTVEDFESVLKINLTGAFNMTQSVLKPMTKARQGAIINISSVVGLTGNVGQANYAASKAGLIGFTKSVAREVAARGIRVNAIAPGFIESDMTDVIPEKMQEAILAQIPMKRIGKGKEVAQVASFLAEQ--EYLTGQVIAIDGGMTMQ
4BO0 Chain:C ((23-268))
MSLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRD---------EWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVG------QTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYMS
General information:
TITO was launched using:
RESULT:
Template:
4BO0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141667 for 1909 contacts (-74.2/contact) +
2D Compatibility (PS) -24894 + (NN) -6818 + (LL) 1240
1D Compatibility (HY) -18000 + (ID) 5400
Total energy: -195539.0 ( -102.43 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_4BO0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BO0-query.scw
PDB file :
Tito_Scwrl_4BO0.pdb
: