Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRKPFIAGNWKMNKNPEEAKAFIEAVASKLPSSELVEAGIAAPALTLSTVLEAAKG---SELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQVSSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK
2VFE Chain:B ((3-244))--RKYFVAANWKCNGTLES----IKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHSERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLI--DNFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGS------SSLIQQEDIDGFLVGNASLK-ESFVDIIKSAM


General information:
TITO was launched using:
RESULT:

Template: 2VFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89863 for 1856 contacts (-48.4/contact) +
2D Compatibility (PS) -25451 + (NN) -7760 + (LL) 1216
1D Compatibility (HY) -20400 + (ID) 4350
Total energy: -146608.0 ( -78.99 by residue)
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_2VFE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VFE-query.scw
PDB file : Tito_Scwrl_2VFE.pdb: