Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLKSAREIEAMDRAGDFLASIHIGLRDIIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAVMDYPYATCCGLNDEVAHAFPRHYTLKQGDLLKVDMVLSEPLDKSIVDVSSLNFDNVAQMKKYTETYSGGLADSCWAYAVGEVSQEVKDLMSVTREAMYIGIEKAVIGNRIGDIGAAIQDYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTSQGEERTY |
| 3PKA Chain:A ((38-285)) | EPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGY----KGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYI---------------------------GGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYE-IWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILTCL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162416 for 2228 contacts (-72.9/contact) +
2D Compatibility (PS) -26845 + (NN) -5883 + (LL) 2128
1D Compatibility (HY) -9600 + (ID) 3700
Total energy: -206316.0 ( -92.60 by residue)
QMean score : 0.481
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