Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MIGDNIKSLRRTHDLTQPEFAKIIGISRNSLSRYENGTSSVSTELIDRICQKFNVSYVDIVGEDKMMTPVEDYQLTIKIEVLKERGSAILSRLYRHQDEQGIAFDDESNPWILISDDVADLVNTKIYLVDTFEELERYNGYLDGIERMLNLANHQVVA
3F52 Chain:A ((22-98))
EPLLREALGAALRSFRADKGVTLRELAEASRVSPGYLSELERGRKEVSSELLASVCHALGASVADVLIEAAGSMALQ---------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3F52.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35352 for 492 contacts (-71.9/contact) +
2D Compatibility (PS) -7528 + (NN) -684 + (LL) 6752
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -42162.0 ( -85.70 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_3F52.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F52-query.scw
PDB file :
Tito_Scwrl_3F52.pdb
: