Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKTIYDITIVGGGPVGLFAAFYAGLRGVS-VKIIESLSELGGQPAILYPEKKIYDIPGYP-VITGRELIDKHIEQLERFKDSIEICLKEEVLSFEKV-DDVFTIQTD-KDQHLSRAIVFACGNGAFAPRLLGLENEENYADNNLFYNVTKLE-QFAGKHVVICGGGDSAVDWANELDKIAASVAIVHRRDAFRAHEHSVDI-LKASGVRILTPYVPIGLNGDSQRVSSLVVQKVKGDEVIELPLDNLIVSFGFSTSNKNLRY----WNLDYKR-SSINVSSLFETTQEGVYAIGDAANYPGKVELIATGYGEAPVAINQAINYIYPDRDNRVVHSTSLIK |
| 3R9U Chain:A ((1-314)) | -SNAMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGM-PGGQITSSS---EIENYPGVAQVMDGISFMAPWSEQCMRFGLK--H-EMVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGS---APKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAAPSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKL-KDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDA--PKQVICAAGDGAVAALSAMAYIESL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238653 for 2618 contacts (-91.2/contact) +
2D Compatibility (PS) -32448 + (NN) -7319 + (LL) 1804
1D Compatibility (HY) -12400 + (ID) 4050
Total energy: -293066.0 ( -111.94 by residue)
QMean score : 0.446
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