Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAQHTIDQTQVIHTKPSALSYKEKTLVMGILNVTPDSFSDGGK-YDSLDKALLHAKEMIDDGAH-----IIDIGGESTRPGAECVSEDEEMSRVIPVIERITKELGVP-----ISVDTYKASVADEAVKAGASIINDIWGAKHDPKMASVAAEH-NVPIVLMH--------NRPERNYNDLLPD-------------MLSDLMESVKI--------------AVEAGVDEKNIILDPGIGFAKTYHDNLAVMNKLEIFSGLGY----------------PVLLATSRKRFIGRVL-DLPPEERAEGTGATVCLGIQKGCDIVRVHDVKQIARMAKMMDAMLNKGGVHHG |
2BMB Chain:A ((225-540)) | ------------------------TYIMAIFNATPDSFSDGGEHFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYRSNVAKEAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILSHTRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQLDDLKDKTVLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFAKTWKQNLQIIRHIPILKNYSFTMNSNNSQVYVNLRNMPVLLGPSRKKFIGHITKDVDAKQRDFATGAVVASCIGFGSDMVRVHDVKNCSKSIKLADAI--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104226 for 1981 contacts (-52.6/contact) +
2D Compatibility (PS) -28112 + (NN) -20101 + (LL) 1916
1D Compatibility (HY) -20400 + (ID) 5450
Total energy: -176373.0 ( -89.03 by residue)
QMean score : 0.367
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