Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MSKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKAIKELLNDDAMNEALVIDQDAIKGTIEKTLTSKKGEEFWKNIFEDTDFAEGFAKTLQTEHEKVIKKLMKDPDYQKMLMSVMQDPGMDKKYSQLAKSQEFRSYLEEVINETLSSPLY------KKQFEDELKKAAKDTAKESE |
| 1GZS Chain:B ((1-165)) | GSLTNKVVKDFMLQTLNDIDIRGSASKD---PAYASQTREAILSAVYSKNKDQCCNLLISKGINI-----------------------APFLQEIGEAAKNAG--LPGTTKNDVFTPSGAGANPFITPLISSANSK--YPRMFINQHQQASFKIYAEKIIMTEVAPLFNECAMPTPQQFQLILENIANKYIQNTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GZS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10481 for 1095 contacts (9.6/contact) +
2D Compatibility (PS) -16596 + (NN) -7853 + (LL) 1716
1D Compatibility (HY) -2000 + (ID) 1050
Total energy: -15302.0 ( -13.97 by residue)
QMean score : 0.463
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