Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSDDELTGLDEFALLAENAEQAGVNGPLPEVERVQAGAISALRWGG-SAPRVIFLHGGGQNAHTWDTVIVGL--GEPALAVDLPGHGHSAWREDGNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMH----GEREFPSFQAMLDLTI-----AAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDA-----IRTFGD-FAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDTR |
| 3G9X Chain:A ((14-292)) | -------------------------------YVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPD-LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWD-EWPEFARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPV-D-REPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNC-KTVDIGPGLHYLQEDNPDLIGSEIARWLPA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145809 for 2193 contacts (-66.5/contact) +
2D Compatibility (PS) -27277 + (NN) -6053 + (LL) 2188
1D Compatibility (HY) -15600 + (ID) 2000
Total energy: -194551.0 ( -88.71 by residue)
QMean score : 0.407
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