Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKAKFQRTKPHVNIGTIGHVDHGKTTLTAAITKVLHDK-FPDLNETKAFDQ---------------IDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELLELVEMEVRELLAAQEFDEDAPVVRVSALKALEGD--------AKWV--ASVEELMNAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVINVNEEVEIVGIRPSTTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGVKREDVERGQVVTKPGT-TTPHTEFEGQVYILSKDEGGRHTPFFNNYRPQFYFRTTDVTGVVT-------------LPEGTEMVMPGDNTNISVKLIQPVAMDEGL------RFAIREGGRTVGAGRVTKIIK
1SKQ Chain:B ((4-427))---------KPHLNLIVIGHVDHGKSTL---VGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEE-----------MRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSVEGQTREHIILAKTMGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKFMRSYGFNTNK--VRFVPVVAPSGDNITHKSENMKWYNGPTLEEYLDQL-ELPPKPV---DKPLRIPIQDVYSISGVGTVPVGRVESGVLKVGDKIVFM---PAGKVGEVRSIETHHTKMDKAEPGDNIGFNVRGVEKKDIKRGDVVGHPNNPPTVADEFTARIIVV-----WHPTALANGYTPVLHVHTASVACRVSELVSKLDPRTGQEAEKNPQFLKQGDVAIVKFKPIKPLCVEKYNEFPPLGRFAMRDMGKTVGVGIIVDV--


General information:
TITO was launched using:
RESULT:

Template: 1SKQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153006 for 2812 contacts (-54.4/contact) +
2D Compatibility (PS) -38732 + (NN) -19121 + (LL) 2812
1D Compatibility (HY) -28800 + (ID) 6750
Total energy: -243597.0 ( -86.63 by residue)
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_1SKQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SKQ-query.scw
PDB file : Tito_Scwrl_1SKQ.pdb: