Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
4OOP Chain:B ((26-165))
-SPFFKVKKLSEKAVIPTRGSPLSAGYDLSSAVDSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDV--GAGVIDADYRGPVGVILFNHS-DADFEVKFGDRIAQLIIEKIVTPDVVEVDDLDE-----TVRGDGGFGSTG-----
General information:
TITO was launched using:
RESULT:
Template:
4OOP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87217 for 917 contacts (-95.1/contact) +
2D Compatibility (PS) -15794 + (NN) -9730 + (LL) 608
1D Compatibility (HY) -8800 + (ID) 2850
Total energy: -123783.0 ( -134.99 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_4OOP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OOP-query.scw
PDB file :
Tito_Scwrl_4OOP.pdb
: