Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPALVVGPAAWHAVHVTQSSSAITPGQTAELYPGDIKSVLLTAEQIQARIAELGEQIGNDYRELSATTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSYGSSTSSSGVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQ
4QRI Chain:A ((31-200))
-----------------------------------DILHPRFSREDISQKVKSLALQISEDYKKLNP------IFICVLKGGVYFFTDLTREIPFSVEINFVQAR----------KIELLKDIDIDLSDRHVIIVEDILDTGFTLQYLVRHIFTRNPASLEIVTLLLKE-----EFPVKYIGWRIPDEFLVGYGLDFDGRYRNLPDIHVLEP----
General information:
TITO was launched using:
RESULT:
Template:
4QRI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145657 for 1173 contacts (-124.2/contact) +
2D Compatibility (PS) -16946 + (NN) -4133 + (LL) 2860
1D Compatibility (HY) -22000 + (ID) 3450
Total energy: -189326.0 ( -161.40 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_4QRI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QRI-query.scw
PDB file :
Tito_Scwrl_4QRI.pdb
: