Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSGIQQNTLMDNDPLAHGYYVADLLVALAVVVLMLRARRTRPELARMLLLGTLIGLVWELPVFGLSAWTNTPIIEWATPLPLPTVVFLLAHSVWDGPLLTMGWLLARALTGEPAGALGLTVQVLWGQLTALAVELSAILAGTWSYVDDLWFNPVMFWFRGHPVTAAMQLTWLLAPLCFAALVRRLALTAR |
| 1VK9 Chain:A ((54-83)) | ---------LFKRFDNLEGSLVIDKMVGKAAASFLLKMK-------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16201 for 130 contacts (-124.6/contact) +
2D Compatibility (PS) -3160 + (NN) -2018 + (LL) 13984
1D Compatibility (HY) -800 + (ID) 350
Total energy: -8545.0 ( -65.73 by residue)
QMean score : 0.339
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